BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G04LP1|AL426260
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1582 0.0
>3x_Contig1786
Length = 33838
Score = 1582 bits (794), Expect = 0.0
Identities = 808/816 (99%)
Strand = Plus / Minus
Query: 1 gatcactaacagacagctattggaagtctttggcttcaagtccaaggaagaccaggacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18216 gatcactaacagacagctattggaagtctttggcttcaagtccaaggaagaccaggacat 18157
Query: 61 gattatttacactgggttcttgcaaatgtgccgtgcaggtttattggctttggaatattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18156 gattatttacactgggttcttgcaaatgtgccgtgcaggtttattggctttggaatattg 18097
Query: 121 ggatccaaaatctaagamatggggccaacctcatatgcmagctagattttctattatgaa 180
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 18096 ggatccaaaatctaagaaatggggccaacctcatatgcaagctagattttctattatgaa 18037
Query: 181 gactctcttgaggtactctgaagacaagaacttcttaaaattggcctataccaaggacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18036 gactctcttgaggtactctgaagacaagaacttcttaaaattggcctataccaaggacga 17977
Query: 241 ctactcagatttgcatatcgagcttgataagtccttaattgagacagtggggcatgccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17976 ctactcagatttgcatatcgagcttgataagtccttaattgagacagtggggcatgccgc 17917
Query: 301 catcgaagactacttgacccacttacacatttacaaggctacaggtgatgtagaaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17916 catcgaagactacttgacccacttacacatttacaaggctacaggtgatgtagaaaatgg 17857
Query: 361 tgtcgcatatttccaggataggtctgatgttgacgaagagctcgcaaagttccgtgatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17856 tgtcgcatatttccaggataggtctgatgttgacgaagagctcgcaaagttccgtgatat 17797
Query: 421 tgtccttgctaagaagctaccaagaaagcmattcatccaagctaacactatcttgtcagg 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 17796 tgtccttgctaagaagctaccaagaaagcaattcatccaagctaacactatcttgtcagg 17737
Query: 481 tgacgaaattactgtcaaggaatacgatgaatcaccaataggcatgatccaatcattcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17736 tgacgaaattactgtcaaggaatacgatgaatcaccaataggcatgatccaatcattcat 17677
Query: 541 tgaacgtgacttgtaaagaatgacggtacgtaagtctgttcactggatgagcttcattgt 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 17676 tgaacgtgacttgtaaagaatgacggtacgtaagtatgttcactggatgagcttcattgt 17617
Query: 601 taaamgtaaagacctatgtyacamatagtctatatcgtttgcgattgtttttctatccct 660
||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 17616 aaaaagtaaagacctatgtaacaaatagtctatatcgtttgcgattgtttttctatccct 17557
Query: 661 tgccttgtctttcactcttgacaacaggtgacggttctaacagaacagaagggttcaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17556 tgccttgtctttcactcttgacaacaggtgacggttctaacagaacagaagggttcaagt 17497
Query: 721 agaaaaaaataaaaccttaaaaatgcagatgctgttcccactgcaagaaaaaagagcacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17496 agaaaaaaataaaaccttaaaaatgcagatgctgttcccactgcaagaaaaaagagcacg 17437
Query: 781 caatcgcctttgaacagtaaccaaggcgtaaaacag 816
||||||||||||||||||||||||||||||||||||
Sbjct: 17436 caatcgcctttgaacagtaaccaaggcgtaaaacag 17401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5360
Number of Sequences: 1807
Number of extensions: 5360
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)